CDS

Accession Number TCMCG057C08478
gbkey CDS
Protein Id XP_018471206.1
Location join(34668616..34668623,34669061..34669561,34670383..34670800,34670894..34670971,34671609..34671668)
Gene LOC108842710
GeneID 108842710
Organism Raphanus sativus

Protein

Length 354aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018615704.1
Definition PREDICTED: zinc finger CCCH domain-containing protein 13-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description transcription initiation from RNA polymerase II promoter
KEGG_TC -
KEGG_Module M00406        [VIEW IN KEGG]
M00430        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K03135        [VIEW IN KEGG]
ko:K12881        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03015        [VIEW IN KEGG]
ko03022        [VIEW IN KEGG]
ko03040        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003713        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005669        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006367        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051123        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070897        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090575        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGAGGTATCAGAGAGTAAGCCCAGATGTTCTTCCCCTCACAAACGGAGCAAAGAAGCCTTACTTAAGACCTTCACCTTCAAGATCAACCCACGAAGACACCACCACCACCATTACACCCAACTCCATCGCCGGCAAAGGATTCAACGGCGGATCATTCACATCGCTAGACGGAGGAGGAGTGCGAATCAGATCCTCCCAGCAAACAGATCCCACCCCTACTACCAAGCGCGGCGGAGATGTGCTGTTACAGTGGGGACAGCGGAAGCGATCGAGAGTCTCTAGAGCCGAGATCCGATCCTCCACCAACACCACCGCCGCCGCGGCTGCCGATGACTCTTCGTCTTCTTCGGGACATGGGAAGATTCAGTCGAACAAGCTTTTAAGAAGATCTGCAAATCCGTCTATGCCTCCTCCTCCACCACCTCCTCCTCATCCGGTTTCCTCTAACCGGAGTTCGAACCATAGAAACGGTTTCGTCGGCGGCAAGGAAATCTTCCTTTTCAGGAATCAAGAAGATCGATCAGCCAACGGATCACCATCAAGGAACATCAATAACGGCCGTACGGTGTCCAGATCGGGAGGCTCAAAGCGATCTCCACCGTCTCCTGACCAAATCGAGAAGAGATCAAGCGTCAGAGATCATCATCATCAGAACCAGAGACAAAACGGGTTGGATCACAACCATAATCAACAGCATCAACGAGTGAGCAGATCAGAATCAATGGCTCACGCTCATCCAGAGCTGGAGACAAACAACAGTGGAGAGAGAGAGAAAGCAGCGCATGTGGAAGTAACAGAGTGGCCAAGGATCTACATTGCCTTGTCTAGGAAAGAGAAGGAAGAAGATTTCTTGGTTATGAAAGGCACAAAGCTTCCTCATCGACCCAGGAAACGAGCTAAGAACATTGATAAATCCCTCCAGTATTGTTTTCCAGGGCTGTGGTTATCTGATCTACCCAAGAACCGTTATGATGTTAGGGAGAAGAAAAATGTGAAGAAGCAGCAGCAGAAACGGAGAGGGTTGAAAGGTATGGAGGATTTGGACACCGACTCCGAGTAA
Protein:  
MMRYQRVSPDVLPLTNGAKKPYLRPSPSRSTHEDTTTTITPNSIAGKGFNGGSFTSLDGGGVRIRSSQQTDPTPTTKRGGDVLLQWGQRKRSRVSRAEIRSSTNTTAAAAADDSSSSSGHGKIQSNKLLRRSANPSMPPPPPPPPHPVSSNRSSNHRNGFVGGKEIFLFRNQEDRSANGSPSRNINNGRTVSRSGGSKRSPPSPDQIEKRSSVRDHHHQNQRQNGLDHNHNQQHQRVSRSESMAHAHPELETNNSGEREKAAHVEVTEWPRIYIALSRKEKEEDFLVMKGTKLPHRPRKRAKNIDKSLQYCFPGLWLSDLPKNRYDVREKKNVKKQQQKRRGLKGMEDLDTDSE